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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3832153_3833288_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3832153 - 3833288

Intron Length:
1136

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGGGGA

5'SS Class:
major

3'SS Sequence:
CTTTCATGCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
TCCGCTTTCATG

Flanking Amino Acid:
SITFPRFKVSRRNLVESVTK

Intron Amino Acid Position:
202

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1
64.2
42.1

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
73.9
0.54
0.9
69.3
35.8

Minor 5ss
27.5
-2.6
3.6
38.1
46.8

Minor BPS
47.1
-0.3
1.9
49.65
45.6

Associated Gene:

Gene:
P2RX1

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3827646 - 3836034
8389