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Intron Name: Anas_platyrhynchos_platyrhynchos_20_384106_384441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

384106 - 384441

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TAACTTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TCGTCTTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

77.6

32.3

Major BPS

74.7

0.61

65.9

40.9

Major PPT

76.6

0.6

0.9

70.3

35.7

Minor 5ss

35.7

-1.6

3.2

45.3

36.6

Minor BPS

81.6

1.07

1.1

87.35

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048218

375662 - 386759

11098

ENSAPLT00000008391

374662 - 386759

12098