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Intron Name: Anas_platyrhynchos_platyrhynchos_20_384523_386424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

384523 - 386424

Intron Length:

1902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAACC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GCCTCCTCACTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.4

33.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

85.6

0.8

0.7

80.7

24.6

Minor 5ss

34.8

-1.7

2.9

42.5

Minor BPS

48.1

-0.1

1.8

54.76

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048218

375662 - 386759

11098

ENSAPLT00000008391

374662 - 386759

12098