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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3867729_3877835_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3867729 - 3877835

Intron Length:

10107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTTG

5'SS Class:

major

3'SS Sequence:

TGCTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGCAC

U12 Branch Point Sequence:

GCACCGTTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

41.4

Major BPS

53.4

0.08

1.4

65.7

Major PPT

82.1

0.72

0.8

73.3

37.2

Minor 5ss

46.5

-0.4

3.1

64.1

47.4

Minor BPS

-0.2

2.3

62.91

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017536

3861405 - 3888965

27561