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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3878370_3886190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3878370 - 3886190

Intron Length:

7821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCACG

5'SS Class:

major

3'SS Sequence:

TTTTGATCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GATACCCTAATT

Flanking Amino Acid:

SNRVSISDAEDCVQLNQYKL

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

66.3

45.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.6

0.67

0.9

74.1

35.6

Minor 5ss

38.3

-1.3

3.1

Minor BPS

60.6

0.41

1.7

76.09

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026969

3877836 - 3888965

11130

ENSAPLT00000017536

3861405 - 3888965

27561