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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3886239_3887304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3886239 - 3887304

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

AGGTGCTGAGCT

Flanking Amino Acid:

QYKLQSEIGKGSYGVVKLAY

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

34.6

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

87.7

0.85

0.7

81.2

36.5

Minor 5ss

40.4

-1.1

2.9

53.8

43.4

Minor BPS

46.4

-0.2

2.1

64.27

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026969

3877836 - 3888965

11130

ENSAPLT00000017536

3861405 - 3888965

27561