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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3887359_3887660_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3887359 - 3887660

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTGAAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

TGCTGCTGAGCT

Flanking Amino Acid:

AYNENDDKYYVTWKQRRVWA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

79.6

34.4

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

53.4

0.08

1.1

47.4

44.1

Minor 5ss

38.6

-1.3

3.3

51.8

38.6

Minor BPS

48.2

-0

2.1

69.66

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026969

3877836 - 3888965

11130