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Intron Name: Anas_platyrhynchos_platyrhynchos_20_389357_389796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

389357 - 389796

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

CATCCCATTACT

Flanking Amino Acid:

AGVAEGWEEDATD*

Intron Amino Acid Position:

1039

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.7

31.8

Major BPS

70.2

0.5

1.1

77.2

Major PPT

80.9

0.69

0.7

72.2

32.4

Minor 5ss

31.7

-2.1

2.6

35.1

34.5

Minor BPS

51.4

0.13

72.04

Associated Gene:

Gene:

HIP1

Ensembl Gene ID:

ENSAPLG00000008219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030367

389232 - 417762

28531

ENSAPLT00000026970

389232 - 417762

28531

ENSAPLT00000008712

389232 - 437615

48384

ENSAPLT00000037426

389232 - 417762

28531