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Intron Name: Anas_platyrhynchos_platyrhynchos_20_389909_390430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

389909 - 390430

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGCAAT

U12 Branch Point Sequence:

GTAGCAATAGCA

Flanking Amino Acid:

QIKRQEMDSQVRVLELENQL

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

0.1

1.4

62.7

41.6

Major PPT

84.3

0.77

0.8

81.3

30.7

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

-0.5

2.1

55.7

42.4

Associated Gene:

Gene:

HIP1

Ensembl Gene ID:

ENSAPLG00000008219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037426

389232 - 417762

28531

ENSAPLT00000030367

389232 - 417762

28531

ENSAPLT00000026970

389232 - 417762

28531

ENSAPLT00000008712

389232 - 437615

48384