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Intron Name: Anas_platyrhynchos_platyrhynchos_20_392604_392692_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

392604 - 392692

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

GCGGCGCTCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

GCACCCTCAGCC

Flanking Amino Acid:

SHMAPMEPADRLLEMCKQCG

Intron Amino Acid Position:

737

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

66.2

39.6

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

58.3

0.19

48.9

39.4

Minor 5ss

31.7

-2.1

3.3

46.2

42.2

Minor BPS

47.4

-0.2

1.8

54.35

42.8

Associated Gene:

Gene:

HIP1

Ensembl Gene ID:

ENSAPLG00000008219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030367

389232 - 417762

28531

ENSAPLT00000026970

389232 - 417762

28531

ENSAPLT00000008712

389232 - 437615

48384

ENSAPLT00000037426

389232 - 417762

28531