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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3943448_3943995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3943448 - 3943995

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGGCGC

5'SS Class:

major

3'SS Sequence:

TGGTGTTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTTTGATGGACA

Flanking Amino Acid:

LRGLHSAVLIGETGSGKTTQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.1

46.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

0.61

0.9

73.6

41.8

Minor 5ss

24.7

-2.9

3.3

32.6

42.6

Minor BPS

46.9

-0.2

2.2

65.44

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031727

3943279 - 3945155

1877