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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3959515_3960012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3959515 - 3960012

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATATCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

ATACACGTATAT

Flanking Amino Acid:

DEIQQELILQEQLVIEEYER

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

71.4

0.53

1.2

63.4

Major PPT

81.2

0.7

0.8

78.1

35.5

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

40.3

-0.6

2.3

59.49

42.9

Associated Gene:

Gene:

RPAIN

Ensembl Gene ID:

ENSAPLG00000012721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013237

3957221 - 3964786

7566