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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3960077_3960416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3960077 - 3960416

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCGTGCGCA

5'SS Class:

major

3'SS Sequence:

CTGTGCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TATGGGAGAACT

Flanking Amino Acid:

SLQAARRGDAMLEDPYELAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.3

54.4

41.8

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

77.5

0.62

0.9

73.4

37.1

Minor 5ss

27.4

-2.6

4.1

38.5

46.7

Minor BPS

38.7

-0.7

2.6

62.88

46.6

Associated Gene:

Gene:

RPAIN

Ensembl Gene ID:

ENSAPLG00000012721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013237

3957221 - 3964786

7566