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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3965300_3965691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3965300 - 3965691

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTTGT

5'SS Class:

major

3'SS Sequence:

ATGCTCTTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

ATGCTCTTTACA

Flanking Amino Acid:

VLDAEEDDEQSEKSWDPRSD

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.9

43.4

Major BPS

79.5

0.73

0.9

36.9

Major PPT

79.4

0.66

0.9

72.8

36.9

Minor 5ss

46.4

-0.4

2.9

67.9

42.9

Minor BPS

57.8

0.24

1.6

66.6

39.4

Associated Gene:

Gene:

NUP88

Ensembl Gene ID:

ENSAPLG00000015794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016516

3958779 - 3971469

12691