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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3966959_3967124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3966959 - 3967124

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

AATCTCTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

ATTGCATTCAGA

Flanking Amino Acid:

INKLHKFLGSDEEDKDSLQE

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

76.1

0.59

0.8

70.4

35.2

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

45.3

-0.3

2.3

62.53

43.7

Associated Gene:

Gene:

NUP88

Ensembl Gene ID:

ENSAPLG00000015794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016516

3958779 - 3971469

12691