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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3968910_3969519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3968910 - 3969519

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTACGTGGG

5'SS Class:

major

3'SS Sequence:

TGTTCTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TGTTCTGTATTT

Flanking Amino Acid:

NTYECITRPLLSTVHPASPP

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.2

52.9

44.2

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

76.8

0.6

73.4

Minor 5ss

33.6

-1.9

3.4

45.3

44.2

Minor BPS

50.5

0.1

2.2

76.04

41.4

Associated Gene:

Gene:

NUP88

Ensembl Gene ID:

ENSAPLG00000015794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016516

3958779 - 3971469

12691