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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3981101_3981335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3981101 - 3981335

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TACTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTTTTGCACT

Flanking Amino Acid:

LEIENCKEEIASISSLKAEL

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.2

0.75

0.8

80.5

36.8

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

59.3

0.37

1.9

83.97

37.1

Associated Gene:

Gene:

RABEP1

Ensembl Gene ID:

ENSAPLG00000016012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041136

3974920 - 4012667

37748

ENSAPLT00000027513

3974920 - 4024714

49795

ENSAPLT00000016754

3977023 - 4009815

32793