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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3982429_3983860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3982429 - 3983860

Intron Length:

1432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TTTTTTTGGAAG

Flanking Amino Acid:

QAKRSVQEQMAVLTQSREQV

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

77.7

0.62

1.1

82.9

32.5

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

51.4

-0.1

1.7

63.54

38.5

Associated Gene:

Gene:

RABEP1

Ensembl Gene ID:

ENSAPLG00000016012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041136

3974920 - 4012667

37748

ENSAPLT00000027513

3974920 - 4024714

49795

ENSAPLT00000016754

3977023 - 4009815

32793