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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3985237_3985989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3985237 - 3985989

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTAATGACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GTAAAATTAAAT

Flanking Amino Acid:

QIQEAETRDQVKKLQVMLRQ

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

61.1

0.25

1.1

53.9

44.7

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

47.9

-0

1.9

66.96

42.2

Associated Gene:

Gene:

RABEP1

Ensembl Gene ID:

ENSAPLG00000016012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041136

3974920 - 4012667

37748

ENSAPLT00000027513

3974920 - 4024714

49795

ENSAPLT00000016754

3977023 - 4009815

32793