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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3988522_3991087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3988522 - 3991087

Intron Length:

2566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCAATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TGTTTTCCAATT

Flanking Amino Acid:

ESLTQLSNEEVHLNSTHGSV

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

80.1

0.68

0.9

38.6

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

49.9

0.08

1.8

73.14

38.1

Associated Gene:

Gene:

RABEP1

Ensembl Gene ID:

ENSAPLG00000016012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041136

3974920 - 4012667

37748

ENSAPLT00000027513

3974920 - 4024714

49795

ENSAPLT00000016754

3977023 - 4009815

32793