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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4003146_4004194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4003146 - 4004194

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAACC

5'SS Class:

major

3'SS Sequence:

TGCTGTTTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAA

U12 Branch Point Sequence:

AGTTTTGGAAAT

Flanking Amino Acid:

EVASLQAVMKETVRDYELQY

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

72.5

37.3

Major BPS

67.1

0.42

37.9

Major PPT

77.7

0.62

0.9

72.1

Minor 5ss

40.3

-1.1

2.9

53.5

43.3

Minor BPS

44.8

-0.3

2.1

64.78

39.6

Associated Gene:

Gene:

RABEP1

Ensembl Gene ID:

ENSAPLG00000016012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041136

3974920 - 4012667

37748

ENSAPLT00000027513

3974920 - 4024714

49795

ENSAPLT00000016754

3977023 - 4009815

32793