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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4004399_4006510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4004399 - 4006510

Intron Length:

2112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TAATACTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATCAAGC

Flanking Amino Acid:

KFKELYLAKEEDLKRQNAVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

21.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.8

0.63

0.9

74.1

40.7

Minor 5ss

42.8

-0.8

2.8

59.5

Minor BPS

47.9

-0.1

2.2

69.2

41.7

Associated Gene:

Gene:

RABEP1

Ensembl Gene ID:

ENSAPLG00000016012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041136

3974920 - 4012667

37748

ENSAPLT00000027513

3974920 - 4024714

49795

ENSAPLT00000016754

3977023 - 4009815

32793