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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4040018_4041566_F

Intron Information:

Intron Rank:

147255

Intron Class:

major

Intron Phase:

Intron Coordinates:

4040018 - 4041566

Intron Length:

1549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GATCCACCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

ATGTCCTGATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

67.9

37.5

Major BPS

78.8

0.71

67.6

40.6

Major PPT

63.5

0.31

0.9

54.7

35.1

Minor 5ss

29.9

-2.3

3.3

35.5

43.1

Minor BPS

59.4

0.27

1.8

69.89

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029565

4032795 - 4042376

9582