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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4046819_4047527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4046819 - 4047527

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCAAT

U12 Branch Point Sequence:

TCAATCTTACCA

Flanking Amino Acid:

LELWDCSGDQKFETCWPALM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

69.1

0.47

1.2

34.1

Major PPT

72.6

0.51

1.1

70.6

39.1

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

0.19

1.7

64.25

42.2

Associated Gene:

Gene:

IFT22

Ensembl Gene ID:

ENSAPLG00000020497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030194

4045418 - 4048964

3547