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Intron Name: Anas_platyrhynchos_platyrhynchos_20_407377_408095_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

407377 - 408095

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TTCATCTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCTTCATCT

Flanking Amino Acid:

HKLLRDGHSNVLKDSVRYKN

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

74.9

35.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

76.7

0.6

69.1

41.7

Minor 5ss

31.3

-2.1

3.2

40.8

38.7

Minor BPS

60.6

0.41

1.8

79.81

42.6

Associated Gene:

Gene:

HIP1

Ensembl Gene ID:

ENSAPLG00000008219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037426

389232 - 417762

28531

ENSAPLT00000026970

389232 - 417762

28531

ENSAPLT00000008712

389232 - 437615

48384