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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4204183_4206929_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4204183 - 4206929

Intron Length:

2747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTAACC

Flanking Amino Acid:

TVLRKTVGPAEPKGHRGAEE

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

65.7

0.35

0.9

66.3

33.4

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

79.5

0.91

1.1

81.25

33.5

Associated Gene:

Gene:

COL26A1

Ensembl Gene ID:

ENSAPLG00000000582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025568

4062861 - 4234764

171904

ENSAPLT00000000652

4062861 - 4234764

171904