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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4204183_4210120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4204183 - 4210120

Intron Length:

5938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TGAATGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAGCCTCCAACT

Flanking Amino Acid:

TVLRKTVGPAGLPGQVGPPG

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

71.9

0.49

61.8

48.2

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

48.4

-0

1.9

67.98

42.4

Associated Gene:

Gene:

COL26A1

Ensembl Gene ID:

ENSAPLG00000000582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035068

4062861 - 4234764

171904