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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4206975_4210120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4206975 - 4210120

Intron Length:

3146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGAATGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAGCCTCCAACT

Flanking Amino Acid:

RGAEEQLIPQGLPGQVGPPG

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

71.9

0.49

61.8

48.2

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

48.4

-0

1.9

67.98

42.4

Associated Gene:

Gene:

COL26A1

Ensembl Gene ID:

ENSAPLG00000000582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025568

4062861 - 4234764

171904

ENSAPLT00000000652

4062861 - 4234764

171904