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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4221595_4224011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4221595 - 4224011

Intron Length:

2417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TATGAGTTAATT

Flanking Amino Acid:

PGPIGVPGSQGLPGSPGQPG

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.8

29.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

73.8

0.54

0.8

65.3

36.2

Minor 5ss

38.1

-1.3

3.6

56.6

Minor BPS

49.6

0.05

2.3

73.87

43.2

Associated Gene:

Gene:

COL26A1

Ensembl Gene ID:

ENSAPLG00000000582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000652

4062861 - 4234764

171904

ENSAPLT00000035068

4062861 - 4234764

171904

ENSAPLT00000025568

4062861 - 4234764

171904