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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4228248_4229966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4228248 - 4229966

Intron Length:

1719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

GTCACATGGAGA

Flanking Amino Acid:

TGERGIKGFPGEPGKKGEEG

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.7

35.4

Major BPS

59.9

0.25

1.2

38.9

Major PPT

86.1

0.81

0.7

85.5

29.2

Minor 5ss

37.3

-1.4

3.4

45.5

Minor BPS

41.6

-0.6

49.99

40.6

Associated Gene:

Gene:

COL26A1

Ensembl Gene ID:

ENSAPLG00000000582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035068

4062861 - 4234764

171904

ENSAPLT00000025568

4062861 - 4234764

171904