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Intron Name: Anas_platyrhynchos_platyrhynchos_20_44071_44784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44071 - 44784

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCATCCCCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAA

U12 Branch Point Sequence:

CTGGTGTGAACC

Flanking Amino Acid:

LQRAARLSRKFQSLQLEREM

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

54.3

0.11

1.4

49.1

46.3

Major PPT

64.7

0.33

0.8

33.2

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

44.1

-0.4

2.2

53.88

44.4

Associated Gene:

Gene:

VPS37D

Ensembl Gene ID:

ENSAPLG00000025155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005882

42922 - 46011

3090

ENSAPLT00000027936

42922 - 46011

3090