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Intron Name: Anas_platyrhynchos_platyrhynchos_20_45373_45525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45373 - 45525

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GCCTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GGTCCCGCAGCT

Flanking Amino Acid:

QAGCLRGRVRGTDGAVPGPR

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

72.7

0.51

0.9

65.3

36.3

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

43.1

-0.4

2.3

63.89

45.5

Associated Gene:

Gene:

VPS37D

Ensembl Gene ID:

ENSAPLG00000025155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001797

31520 - 45566

14047

ENSAPLT00000047429

31520 - 45566

14047

ENSAPLT00000005882

42922 - 46011

3090