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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4538322_4549766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4538322 - 4549766

Intron Length:

11445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATGAAAC

Flanking Amino Acid:

TFLCVPVTLKDLRKQVAPLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.9

0.7

0.8

73.5

37.1

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

47.3

-0.2

63.26

41.3

Associated Gene:

Gene:

CUX1

Ensembl Gene ID:

ENSAPLG00000002588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046157

4538154 - 4682169

144016