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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4549815_4563518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4549815 - 4563518

Intron Length:

13704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ATCACCCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTTTCTCATCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

67.6

0.4

0.8

63.5

33.4

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

56.8

0.21

1.8

70.93

41.6

Associated Gene:

Gene:

CUX1

Ensembl Gene ID:

ENSAPLG00000002588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046157

4538154 - 4682169

144016

ENSAPLT00000002695

4549767 - 4682169

132403