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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4582218_4583037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4582218 - 4583037

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGGCAT

5'SS Class:

major

3'SS Sequence:

TTATGCCTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AGTGCTGTAATG

Flanking Amino Acid:

AEHKVQALQTALEKTRTELF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

63.4

42.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

77.2

0.61

0.9

74.5

36.1

Minor 5ss

34.9

-1.7

3.2

47.5

Minor BPS

47.1

-0.3

2.1

53.72

42.1

Associated Gene:

Gene:

CUX1

Ensembl Gene ID:

ENSAPLG00000002588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046157

4538154 - 4682169

144016

ENSAPLT00000002695

4549767 - 4682169

132403