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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4583105_4614934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4583105 - 4614934

Intron Length:

31830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CATGTGATAACA

Flanking Amino Acid:

KTKYDEETTAKADEIEMIMT

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

80.8

0.69

0.8

72.9

37.4

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

43.8

-0.4

2.3

56.48

42.9

Associated Gene:

Gene:

CUX1

Ensembl Gene ID:

ENSAPLG00000002588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046157

4538154 - 4682169

144016

ENSAPLT00000002695

4549767 - 4682169

132403