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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4614984_4625910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4614984 - 4625910

Intron Length:

10927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTCTTTTCACC

Flanking Amino Acid:

IMTDLERANQRAEVAQREAE

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

100

1.24

0.5

100

Major PPT

83.6

0.76

0.8

81.5

30.3

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

55.2

0.15

1.7

66.58

39.6

Associated Gene:

Gene:

CUX1

Ensembl Gene ID:

ENSAPLG00000002588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046157

4538154 - 4682169

144016

ENSAPLT00000002695

4549767 - 4682169

132403