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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4639281_4640294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4639281 - 4640294

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGAAT

5'SS Class:

major

3'SS Sequence:

TGATTTTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCTTTTAGAAAC

Flanking Amino Acid:

FAPSESSGAQDSSKPLEVLL

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

71.7

39.6

Major BPS

0.85

0.9

39.9

Major PPT

79.4

0.66

0.8

78.1

36.2

Minor 5ss

32.9

-1.9

3.4

48.5

47.3

Minor BPS

47.3

-0.2

1.8

60.83

38.3

Associated Gene:

Gene:

CUX1

Ensembl Gene ID:

ENSAPLG00000002588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046157

4538154 - 4682169

144016

ENSAPLT00000002695

4549767 - 4682169

132403