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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4649781_4666542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4649781 - 4666542

Intron Length:

16762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAGC

5'SS Class:

major

3'SS Sequence:

TTTTTAATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

DSLQQGCASSESTPKTSASC

Intron Amino Acid Position:

931

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

42.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.7

0.85

0.8

82.6

32.6

Minor 5ss

39.8

-1.1

2.8

52.6

44.1

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

CUX1

Ensembl Gene ID:

ENSAPLG00000002588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002695

4549767 - 4682169

132403