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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4666846_4671272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4666846 - 4671272

Intron Length:

4427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAATCGC

5'SS Class:

major

3'SS Sequence:

AATTTCATATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CCATTTTCAATT

Flanking Amino Acid:

VKEVLTDNNLGQRLFGETIL

Intron Amino Acid Position:

1129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

62.2

42.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

66.8

0.38

65.4

40.1

Minor 5ss

34.1

-1.8

41.5

40.1

Minor BPS

52.4

0.15

1.5

63.73

41.7

Associated Gene:

Gene:

CUX1

Ensembl Gene ID:

ENSAPLG00000002588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046157

4538154 - 4682169

144016