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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4704209_4705934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4704209 - 4705934

Intron Length:

1726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCACTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CCTGCCTTCACT

Flanking Amino Acid:

IKFLQSYPGRGSSRDDTELR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

79.6

0.67

0.8

73.6

31.3

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

60.7

0.42

1.9

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026207

4703066 - 4786578

83513

ENSAPLT00000021833

4699165 - 4786578

87414