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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4706019_4706143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4706019 - 4706143

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGCA

5'SS Class:

major

3'SS Sequence:

TTTGTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCAAAC

U12 Branch Point Sequence:

GGGCCCCAAACC

Flanking Amino Acid:

LDPFSSFSRKERQRKYLSLS

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

66.9

38.7

Major BPS

-0.1

50.5

30.4

Major PPT

83.4

0.75

0.9

77.3

Minor 5ss

28.4

-2.5

3.6

38.8

46.4

Minor BPS

45.7

-0.3

54.47

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026207

4703066 - 4786578

83513

ENSAPLT00000021833

4699165 - 4786578

87414