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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4706201_4784908_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4706201 - 4784908

Intron Length:

78708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CCGTGCTGAAAT

Flanking Amino Acid:

SPWDKATLSMGRLILSNKTA

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

0.42

1.1

57.3

41.7

Major PPT

72.6

0.51

0.9

65.4

36.2

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

47.1

-0.1

61.6

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026207

4703066 - 4786578

83513

ENSAPLT00000021833

4699165 - 4786578

87414