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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4715299_4716896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4715299 - 4716896

Intron Length:

1598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

CTGTGTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

GTGTCACTACCT

Flanking Amino Acid:

FSPTQETHLFTASYDKRIAL

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

70.3

40.5

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

71.7

0.49

0.9

64.9

36.5

Minor 5ss

-1

59.3

Minor BPS

47.3

-0.1

2.2

70.86

45.4

Associated Gene:

Gene:

LRWD1

Ensembl Gene ID:

ENSAPLG00000003533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003621

4712048 - 4718872

6825