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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4820657_4821251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4820657 - 4821251

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGGGA

5'SS Class:

major

3'SS Sequence:

TTTGTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

ATACTGATGACT

Flanking Amino Acid:

LRLERLMRNPEKTVPIPEKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.5

40.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

23.6

-3

3.3

43.5

Minor BPS

43.8

-0.4

2.2

64.3

39.7

Associated Gene:

Gene:

PRKRIP1

Ensembl Gene ID:

ENSAPLG00000026029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029010

4820537 - 4825663

5127

ENSAPLT00000017391

4820537 - 4828019

7483