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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4821331_4822779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4821331 - 4822779

Intron Length:

1449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAGATG

5'SS Class:

major

3'SS Sequence:

ATTTTTATTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCTTCTAGC

Flanking Amino Acid:

PPPEFVRDVMGSSAGAGSGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.7

44.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.1

0.75

0.8

78.9

33.6

Minor 5ss

34.8

-1.7

3.3

39.8

Minor BPS

47.2

-0.2

2.1

63.41

42.2

Associated Gene:

Gene:

PRKRIP1

Ensembl Gene ID:

ENSAPLG00000026029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029010

4820537 - 4825663

5127

ENSAPLT00000017391

4820537 - 4828019

7483