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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4823736_4825542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4823736 - 4825542

Intron Length:

1807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CATTGCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTTTTCATT

Flanking Amino Acid:

EEQTAKRRRKRQKLKEKKLQ

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.1

38.4

Major BPS

100

1.24

0.5

100

Major PPT

80.8

0.69

0.9

36.8

Minor 5ss

-2.3

3.5

39.6

45.9

Minor BPS

60.6

0.42

1.7

78.3

39.3

Associated Gene:

Gene:

PRKRIP1

Ensembl Gene ID:

ENSAPLG00000026029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031635

4820967 - 4825618

4652

ENSAPLT00000029010

4820537 - 4825663

5127