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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4968610_4969569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4968610 - 4969569

Intron Length:

960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTACGTAGG

5'SS Class:

major

3'SS Sequence:

TGTTTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATC

Flanking Amino Acid:

HGAALEEPPDPPI*

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

65.8

45.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.2

0.81

0.7

85.6

29.2

Minor 5ss

36.5

-1.5

46.3

42.3

Minor BPS

74.9

0.76

1.1

33.7

Associated Gene:

Gene:

SRRM3

Ensembl Gene ID:

ENSAPLG00000004545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043821

4967825 - 4979266

11442