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Intron Name: Anas_platyrhynchos_platyrhynchos_20_4972225_4976417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4972225 - 4976417

Intron Length:

4193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TAGCCCCGAATT

Flanking Amino Acid:

LTREDQHGRQIVIENHHGLD

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

74.4

36.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

74.9

0.56

0.9

71.7

32.7

Minor 5ss

34.5

-1.8

3.3

44.7

43.5

Minor BPS

49.6

0.05

1.8

68.83

41.6

Associated Gene:

Gene:

SRRM3

Ensembl Gene ID:

ENSAPLG00000004545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034724

4965984 - 4979266

13283

ENSAPLT00000027876

4968225 - 4979266

11042

ENSAPLT00000004667

4966353 - 4979266

12914

ENSAPLT00000043821

4967825 - 4979266

11442

ENSAPLT00000038512

4964750 - 4979266

14517