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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5001651_5002614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5001651 - 5002614

Intron Length:

964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GGGTGTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GTAACTTAAAAT

Flanking Amino Acid:

VIPAGVPRKPGMTRDDLFNT

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

60.8

0.24

1.1

50.4

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

49.8

0.06

1.8

67.77

42.5

Associated Gene:

Gene:

MDH2

Ensembl Gene ID:

ENSAPLG00000004591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004740

4997003 - 5006522

9520